Summarise cause-of-death check results
Arguments
- cod_check
A data.frame output of the various
cod_check_code_*functions- simplify
Logical. Should output be converted into a data.frame? Default is FALSE.
Value
If simplify is FALSE (default), a list of summary check outputs.
Otherwise, a tabulated summary of check outputs.
Examples
cod_check_code(
cod_data_raw_example$code, version = "icd11",
sex = cod_data_raw_example$sex, age = cod_data_raw_example$age
) |>
cod_check_code_summary()
#> $`Code structure`
#> # A tibble: 65 × 2
#> cod_check_note n
#> <fct> <int>
#> 1 No issues found in CoD code 20
#> 2 CoD code has a period (`.`) character in the wrong place 0
#> 3 CoD code starts with `O` or `I` 0
#> 4 CoD code has a period (`.`) character in the wrong place; CoD code sta… 0
#> 5 CoD code has a number as its second value 0
#> 6 CoD code has a period (`.`) character in the wrong place; CoD code has… 0
#> 7 CoD code starts with `O` or `I`; CoD code has a number as its second v… 0
#> 8 CoD code has a period (`.`) character in the wrong place; CoD code sta… 0
#> 9 CoD code has `O` or `I` as its second value 0
#> 10 CoD code has a period (`.`) character in the wrong place; CoD code has… 0
#> # ℹ 55 more rows
#>
#> $`Ill-defined code`
#> # A tibble: 2 × 2
#> cod_check_note n
#> <fct> <int>
#> 1 No issues found in CoD code 20
#> 2 CoD code is an ill-defined code 0
#>
#> $`Unlikely cause-of-death code`
#> # A tibble: 2 × 2
#> cod_check_note n
#> <fct> <int>
#> 1 No issues found in CoD code 20
#> 2 CoD code is an unlikely cause-of-death 0
#>
#> $`Code not appropriate for sex`
#> # A tibble: 2 × 2
#> cod_check_note n
#> <fct> <int>
#> 1 No issues found in CoD code 20
#> 2 CoD code is not appropriate for person's sex 0
#>
#> $`Code not appropriate for age`
#> # A tibble: 2 × 2
#> cod_check_note n
#> <fct> <int>
#> 1 No issues found in CoD code 20
#> 2 CoD code is not appropriate for person's age 0
#>
#> $Overall
#> # A tibble: 2 × 2
#> cod_check_note n
#> <fct> <int>
#> 1 No issues found in CoD code 20
#> 2 Issues found in CoD code 0
#>