Process variable of interest from Pandemic PACT website data by a grouping variable

Usage

pact_table_topic_group(
  pact_data_list_cols,
  topic,
  group = NULL,
  na_values = NULL
)

pact_table_disease(pact_data_list_cols, group = NULL, na_values = NULL)

pact_table_category(
  pact_data_list_cols,
  topic = c("ResearchCat", "ResearchSubcat"),
  na_values = NULL
)

pact_table_location_funder(
  pact_data_list_cols,
  topic = c("FunderRegion", "FunderCountry"),
  na_values = NULL
)

pact_table_location_institution(
  pact_data_list_cols,
  topic = c("ResearchInstitutionRegion", "ResearchInstitutionCountry"),
  na_values = NULL
)

pact_table_location_research(
  pact_data_list_cols,
  topic = c("ResearchLocationRegion", "ResearchLocationCountry"),
  na_values = NULL
)

Arguments

pact_data_list_cols: A data.frame for the Pandemic PACT dataset read from the Pandemic PACT website that has already been pre-processed to have list columns for nested variables. This is usually obtained via a call to pact_process_website() with col_list = TRUE.
topic: A character value of the variable name in pact_data for the topic of interest.
group: A character value or vector of up to two values of the variable name/s in pact_data_list_cols to use as grouping variable/s. When specified as NULL (default), no grouping is applied to the tabulation based on the topic of interest and group specified.
na_values: A character value or vector of values for strings to be considered as NA for topic and group. If NULL (default), topic and group are kept as is.

Value

A data.frame structured based on specification. If group is NULL, the data.frame presents values for topic as first column and then either frequencies/counts of grants per topic value or sum of monetary amount of grants per topic. if group has one value, the data.frame presents values for group as first column followed by either frequencies/counts of grants per group or sum of monetary amount of grants per group then followed by the topics within each group followed by either frequencies/counts of grants per topic by group or sum of monetary amount of grants per topic by group.

Examples

if (FALSE) { # \dontrun{
  df <- pact_read_website() |> pact_process_website()
  pact_table_topic_group(df, topic = "Disease")
} # }